BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020H02SP1|AL427677
(871 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1578 1675 0.0
>3x_Contig1578
Length = 13178
Score = 1675 bits (838), Expect = 0.0
Identities = 855/866 (98%), Gaps = 1/866 (0%)
Strand = Plus / Plus
Query: 1 gcactgcaagtyattgtccaaatcttgctcgtcttcttccagtaacacgttgatacttct 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5055 gcactgcaagtcattgtccaaatcttgctcgtcttcttccagtaacacgttgatacttct 5114
Query: 61 tgtagaagagaaaacagaactgtgtcttgtgtcagccagtgaaggtggtgtagaagaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5115 tgtagaagagaaaacagaactgtgtcttgtgtcagccagtgaaggtggtgtagaagaaga 5174
Query: 121 acaaataattctctgttcatcttcttcttcaaaactcgtctgtaaaaahhtcaaattgtg 180
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 5175 acaaataattctctgttcatcttcttcttcaaaactcgtctgtaaaaatttcaaattgtg 5234
Query: 181 aacgtgaatcaaatggacaggctgagtatggatcatcgacggcatatggatggaccttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5235 aacgtgaatcaaatggacaggctgagtatggatcatcgacggcatatggatggaccttgg 5294
Query: 241 ctgtaaatcgtgtcgactgawaacatgcttctcatgaaaatcaaggcttacatcatcttc 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 5295 ctgtaaatcgtgtcgactgataacatgcttctcatgaaaatcaaggcttacatcatcttc 5354
Query: 301 gagatcagaaagtgccaatwcaccatgccattccatgttaactccacattcttgcaggtc 360
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5355 gagatcagaaagtgccaattcaccatgccattccatgttaactccacattcttgcaggtc 5414
Query: 361 gtccagtttcaaatagctagaaahahccarctcgcagtgcattgtattgggtaaagtata 420
||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||
Sbjct: 5415 gtccagtttcaaatagctagaaatatccagctcgcagtgcattgtattgggtaaagtata 5474
Query: 421 thaagcttctatggtaaccagttagtatttcactatcagtttttttttatgcacggtaat 480
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5475 ttaagcttctatggtaaccagttagtatttcactatcagtttttttttatgcacggtaat 5534
Query: 481 gaggcaaccgatagaaaaagaaagacagacaagaatatgtcaaaagcctcaaaaacgata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5535 gaggcaaccgatagaaaaagaaagacagacaagaatatgtcaaaagcctcaaaaacgata 5594
Query: 541 gacctatatataagcttggtagatagcattccacttcaaactgcatatactaaagttaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5595 gacctatatataagcttggtagatagcattccacttcaaactgcatatactaaagttaga 5654
Query: 601 taaaactagatttatcctaaaataattcccaaattaaccctaaatcatgtcatatcgtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5655 taaaactagatttatcctaaaataattcccaaattaaccctaaatcatgtcatatcgtat 5714
Query: 661 catgcccagttacatctagatccagaaacaaggtggaaacaggagtaaaaacaatattga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5715 catgcccagttacatctagatccagaaacaaggtggaaacaggagtaaaaacaatattga 5774
Query: 721 gactgggataaactaataaaactaattaactagttaattataatgcaagawtttaccaga 780
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 5775 gactgggataaactaataaaactaattaactagttaattataatgcaagaatttaccaga 5834
Query: 781 tagaaccgtagcatgaaacaagggcggtattaactgtaaaaaaaataatttttttttctg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835 tagaaccgtagcatgaaacaagggcggtattaactgtaaaaaaaataatttttttttctg 5894
Query: 841 atctgatttga-ttaatttgatttgc 865
||||||||||| ||||||||||||||
Sbjct: 5895 atctgatttgatttaatttgatttgc 5920
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9056
Number of Sequences: 1807
Number of extensions: 9056
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 871
length of database: 10,358,551
effective HSP length: 16
effective length of query: 855
effective length of database: 10,329,639
effective search space: 8831841345
effective search space used: 8831841345
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)